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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7971751 chr12:56478658 A/C RPS26P11 chrX:71264395-71264742:+ -0.62 -12.04 2.5E-29 Box Plot
THCA rs79727658 chr8:10128894 C/A SGK223 chr8:8175258-8244008:- 0.36 5.92 6.33E-9 Box Plot
THCA rs79785250 chr16:50149313 C/T NELF chr9:140342025-140353786:- 0.45 5.91 6.53E-9 Box Plot
THCA rs79786315 chr5:43806076 G/C UQCRC1 chr3:48636435-48648409:- -0.35 -6.07 2.66E-9 Box Plot
THCA rs7986929 chr13:82085860 C/T LHX1 chr17:35294084-35301912:+ 0.31 6.49 2.21E-10 Box Plot
THCA rs79919947 chr18:58567998 T/C ZNHIT1 chr7:100860949-100867471:+ -0.26 -5.94 5.56E-9 Box Plot
THCA rs79930612 chr6:170819924 G/A NCRNA00115 chr1:761587-762902:- 0.59 6.73 4.8E-11 Box Plot
THCA rs79973559 chr12:25308522 A/T CSNK2A1P chr11:11373323-11374904:- -0.33 -5.93 5.78E-9 Box Plot
THCA rs7998733 chr13:103141533 C/T VWA2 chr10:115999089-116051272:+ -0.27 -6.43 3.1E-10 Box Plot
THCA rs79997997 chr12:94781861 T/C C6orf176 chr6:166337536-166401527:- -0.53 -5.93 5.75E-9 Box Plot
THCA rs8000393 chr13:103137179 C/T VWA2 chr10:115999089-116051272:+ 0.27 6.21 1.17E-9 Box Plot
THCA rs8003117 chr14:39775630 G/A LOC647288 chr13:75811890-75814517:- 0.61 13.18 4.64E-34 Box Plot
THCA rs8003157 chr14:66707134 T/G ATP6V1D chr14:67761088-67826982:- 0.4 6.85 2.34E-11 Box Plot
THCA rs8003342 chr14:66716159 C/G ATP6V1D chr14:67761088-67826982:- -0.36 -6.52 1.81E-10 Box Plot
THCA rs8003397 chr14:39891459 C/T LOC647288 chr13:75811890-75814517:- -0.49 -8.92 9.95E-18 Box Plot